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apbs


Information about the package, apbs, which is shipped with common Linux distributions. The apbs package is designed for, Adaptive Poisson Boltzmann Solver.


Package Name:

apbs

Summary:

Adaptive Poisson Boltzmann Solver

Description:

APBS is a software package for the numerical solution of the Poisson-Boltzmann equation (PBE), one of the most popular continuum models for describing electrostatic interactions between molecular solutes in salty, aqueous media. APBS was designed to efficiently evaluate electrostatic properties for such simulations for a wide range of length scales to enable the investigation of molecules with tens to millions of atoms. It is also widely used in molecular visualization (in such applications as PyMOL).

Architecture:

x86_64

Version:

1.2.1

Release:

4.el6

Size:

332 k

Repository:

epel

From Repository:

Licence:

LGPLv2+ and BSD



Handy Yum Commands for apbs


Control the apbs package with the following handy commands outlined below.


Command

Description of Command

yum install apbs

This command will install apbs on the server.

yum remove apbs

This command will un-install apbs on the server. When you run this command, you will be asked if you are sure that you want to remove apbs, so you have to manually confirm that you want to do this.

yum -y remove apbs

This command will un-install apbs on the server. When you run this command with th e -y flag, you will not be prompted to check that you are sure you want to remove the package - so be sure you absolutely want to remove apbs when using the -y flag.

yum update apbs

This command will update apbs to the latest version. When you run this command, you will be asked if you are sure that you want to remove apbs, so you have to manually confirm that you want to do this.

yum -y update apbs

This command will update apbs to the latest version. When you run this command with the -y flag, you will not be prompted to check that you are sure you want to remove the package - so be sure you absolutely want to remove apbs when using the -y flag.

yum info apbs

This command will show you core information about the apbs package.

yum deplist apbs

This command will show you the dependencies for apbs. Thankfully, when using Yum, if dependencies are required, these are also installed at the same time so you don't have to worry too much about that.

yum check-update apbs

This command will check if there is an update waiting on apbs. When you run this command this will return nothing if there is nothing to update, or, will return the package name if the package is due to be updated.